Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-17 in SRS Ovarian Hendrix Cluster 38 Table contains all genes in the SRS Ovarian Hendrix cluster number 38. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-17 5192 PEX10 peroxisomal biogenesis factor 10 [Source:HGNC Symbol;Acc:8851] T 432 ASGR1 asialoglycoprotein receptor 1 [Source:HGNC Symbol;Acc:742] zzz999 2584 GALK1 galactokinase 1 [Source:HGNC Symbol;Acc:4118] zzz999 4194 MDM4 Mdm4 p53 binding protein homolog (mouse) [Source:HGNC Symbol;Acc:6974] T 55794 DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:HGNC Symbol;Acc:17330] zzz999 10461 MERTK c-mer proto-oncogene tyrosine kinase [Source:HGNC Symbol;Acc:7027] zzz999 85453 TSPYL5 TSPY-like 5 [Source:HGNC Symbol;Acc:29367] zzz999 2001 ELF5 E74-like factor 5 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3320] zzz999 1174 AP1S1 adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559] zzz999 5164 PDK2 pyruvate dehydrogenase kinase, isozyme 2 [Source:HGNC Symbol;Acc:8810] zzz999 5198 PFAS phosphoribosylformylglycinamidine synthase [Source:HGNC Symbol;Acc:8863] zzz999 6391 SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Source:HGNC Symbol;Acc:10682] T 8533 COPS3 COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) [Source:HGNC Symbol;Acc:2239] zzz999 10620 ARID3B AT rich interactive domain 3B (BRIGHT-like) [Source:HGNC Symbol;Acc:14350] zzz999 10101 NUBP2 nucleotide binding protein 2 (MinD homolog, E. coli) [Source:HGNC Symbol;Acc:8042] zzz999 8501 SLC43A1 solute carrier family 43, member 1 [Source:HGNC Symbol;Acc:9225] zzz999 55178 RNMTL1 RNA methyltransferase like 1 [Source:HGNC Symbol;Acc:18485] T 6400 SEL1L sel-1 suppressor of lin-12-like (C. elegans) [Source:HGNC Symbol;Acc:10717] zzz999 8209 C21orf33 chromosome 21 open reading frame 33 [Source:HGNC Symbol;Acc:1273] zzz999 8703 B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 [Source:HGNC Symbol;Acc:926] zzz999 23269 MGA MAX gene associated [Source:HGNC Symbol;Acc:14010] zzz999 64089 SNX16 sorting nexin 16 [Source:HGNC Symbol;Acc:14980] P 6045 RNF2 ring finger protein 2 [Source:HGNC Symbol;Acc:10061] P 10564 ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:HGNC Symbol;Acc:15853] zzz999 29777 ABT1 activator of basal transcription 1 [Source:HGNC Symbol;Acc:17369] zzz999 10472 ZNF238 zinc finger protein 238 [Source:HGNC Symbol;Acc:13030] P T 9049 AIP aryl hydrocarbon receptor interacting protein [Source:HGNC Symbol;Acc:358] zzz999 2235 FECH ferrochelatase [Source:HGNC Symbol;Acc:3647] zzz999 7738 ZNF184 zinc finger protein 184 [Source:HGNC Symbol;Acc:12975] zzz999 27141 CIDEB cell death-inducing DFFA-like effector b [Source:HGNC Symbol;Acc:1977] zzz999 1773 DNASE1 deoxyribonuclease I [Source:HGNC Symbol;Acc:2956] zzz999 9868 TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:11985] T 23589 CARHSP1 calcium regulated heat stable protein 1, 24kDa [Source:HGNC Symbol;Acc:17150] T 659 BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) [Source:HGNC Symbol;Acc:1078] P 948 CD36 CD36 molecule (thrombospondin receptor) [Source:HGNC Symbol;Acc:1663] zzz999 9310 ZNF235 zinc finger protein 235 [Source:HGNC Symbol;Acc:12866] zzz999 7775 ZNF232 zinc finger protein 232 [Source:HGNC Symbol;Acc:13026] zzz999 8467 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:11101] zzz999 4521 NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:HGNC Symbol;Acc:8048] zzz999 26750 RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10439] zzz999 10449 ACAA2 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:83] zzz999 408 ARRB1 arrestin, beta 1 [Source:HGNC Symbol;Acc:711] zzz999 22926 ATF6 activating transcription factor 6 [Source:HGNC Symbol;Acc:791] zzz999 25836 NIPBL Nipped-B homolog (Drosophila) [Source:HGNC Symbol;Acc:28862] zzz999 2729 GCLC glutamate-cysteine ligase, catalytic subunit [Source:HGNC Symbol;Acc:4311] zzz999 54475 NLE1 notchless homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:19889] zzz999 988 CDC5L CDC5 cell division cycle 5-like (S. pombe) [Source:HGNC Symbol;Acc:1743] zzz999 8574 AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) [Source:HGNC Symbol;Acc:389] zzz999 6746 SSR2 signal sequence receptor, beta (translocon-associated protein beta) [Source:HGNC Symbol;Acc:11324] zzz999 6204 RPS10 ribosomal protein S10 [Source:HGNC Symbol;Acc:10383] zzz999 6514 SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 [Source:HGNC Symbol;Acc:11006] zzz999 1910 EDNRB endothelin receptor type B [Source:HGNC Symbol;Acc:3180] zzz999 10084 PQBP1 polyglutamine binding protein 1 [Source:HGNC Symbol;Acc:9330] zzz999 8027 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:HGNC Symbol;Acc:11357] zzz999 3235 HOXD9 homeobox D9 [Source:HGNC Symbol;Acc:5140] zzz999 80013 FAM188A family with sequence similarity 188, member A [Source:HGNC Symbol;Acc:23578] P T 9374 PPT2 palmitoyl-protein thioesterase 2 [Source:HGNC Symbol;Acc:9326] zzz999 4705 NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [Source:HGNC Symbol;Acc:7684] zzz999 9412 MED21 mediator complex subunit 21 [Source:HGNC Symbol;Acc:11473] zzz999 79968 WDR76 WD repeat domain 76 [Source:HGNC Symbol;Acc:25773] zzz999 387032 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 [Source:HGNC Symbol;Acc:13854] T 80306 MED28 mediator complex subunit 28 [Source:HGNC Symbol;Acc:24628] zzz999 5511 PPP1R8 protein phosphatase 1, regulatory (inhibitor) subunit 8 [Source:HGNC Symbol;Acc:9296] zzz999 8790 TNNI3K TNNI3 interacting kinase [Source:HGNC Symbol;Acc:19661] T 757 TMEM50B transmembrane protein 50B [Source:HGNC Symbol;Acc:1280] P T 2911 GRM1 glutamate receptor, metabotropic 1 [Source:HGNC Symbol;Acc:4593] T 2799 GNS glucosamine (N-acetyl)-6-sulfatase [Source:HGNC Symbol;Acc:4422] P T 8293 SERF1A small EDRK-rich factor 1A (telomeric) [Source:HGNC Symbol;Acc:10755] T 10254 STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:HGNC Symbol;Acc:11358] T 8431 NR0B2 nuclear receptor subfamily 0, group B, member 2 [Source:HGNC Symbol;Acc:7961] zzz999 80067 DCAF17 DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:25784] zzz999 55196 C12orf35 chromosome 12 open reading frame 35 [Source:HGNC Symbol;Acc:25559] zzz999 55166 CENPQ centromere protein Q [Source:HGNC Symbol;Acc:21347] T 1477 CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa [Source:HGNC Symbol;Acc:2483] zzz999 23412 COMMD3 COMM domain containing 3 [Source:HGNC Symbol;Acc:23332] T 253725 FAM21C family with sequence similarity 21, member C [Source:HGNC Symbol;Acc:23414] zzz999 9697 TRAM2 translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:16855] T 51170 HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 [Source:HGNC Symbol;Acc:22960] zzz999 2909 GRLF1 glucocorticoid receptor DNA binding factor 1 [Source:HGNC Symbol;Acc:4591] P T 6731 SRP72 signal recognition particle 72kDa [Source:HGNC Symbol;Acc:11303] zzz999 10419 PRMT5 protein arginine methyltransferase 5 [Source:HGNC Symbol;Acc:10894] zzz999 27042 DIEXF digestive organ expansion factor homolog (zebrafish) [Source:HGNC Symbol;Acc:28440] T 6251 RSU1 Ras suppressor protein 1 [Source:HGNC Symbol;Acc:10464] zzz999 6778 STAT6 signal transducer and activator of transcription 6, interleukin-4 induced [Source:HGNC Symbol;Acc:11368] zzz999 57827 C6orf47 chromosome 6 open reading frame 47 [Source:HGNC Symbol;Acc:19076] T 23065 KIAA0090 KIAA0090 [Source:HGNC Symbol;Acc:28957] zzz999 1781 DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 [Source:HGNC Symbol;Acc:2964] zzz999 8446 DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:HGNC Symbol;Acc:3066] zzz999 55750 AGK acylglycerol kinase [Source:HGNC Symbol;Acc:21869] T 1390 CREM cAMP responsive element modulator [Source:HGNC Symbol;Acc:2352] P T 5689 PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 [Source:HGNC Symbol;Acc:9537] zzz999 9340 GLP2R glucagon-like peptide 2 receptor [Source:HGNC Symbol;Acc:4325] zzz999 8454 CUL1 cullin 1 [Source:HGNC Symbol;Acc:2551] P 56993 TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:HGNC Symbol;Acc:18002] zzz999 2665 GDI2 GDP dissociation inhibitor 2 [Source:HGNC Symbol;Acc:4227] zzz999 55503 TRPV6 transient receptor potential cation channel, subfamily V, member 6 [Source:HGNC Symbol;Acc:14006] T 4795 NFKBIL1 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 [Source:HGNC Symbol;Acc:7800] zzz999 55012 PPP2R3C protein phosphatase 2, regulatory subunit B'', gamma [Source:HGNC Symbol;Acc:17485] zzz999 1071 CETP cholesteryl ester transfer protein, plasma [Source:HGNC Symbol;Acc:1869] zzz999 28952 CCDC22 coiled-coil domain containing 22 [Source:HGNC Symbol;Acc:28909] zzz999 23208 SYT11 synaptotagmin XI [Source:HGNC Symbol;Acc:19239] zzz999 27123 DKK2 dickkopf homolog 2 (Xenopus laevis) [Source:HGNC Symbol;Acc:2892] T 5191 PEX7 peroxisomal biogenesis factor 7 [Source:HGNC Symbol;Acc:8860] zzz999 328 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:HGNC Symbol;Acc:587] zzz999 55315 SLC29A3 solute carrier family 29 (nucleoside transporters), member 3 [Source:HGNC Symbol;Acc:23096] zzz999 63899 NSUN3 NOP2/Sun domain family, member 3 [Source:HGNC Symbol;Acc:26208] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.